Insertion junction: CLIP2.010049_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010049
Chromosome:chromosome 10
Location:1506266
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428678 GID1,MNMG1,MNMG (1 of 1) K03495 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme (gidA, mnmG, MTO1); tRNA uridine 5-carboxymethylaminomethyl modification enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTTATGGTTGTGTTCGGGTCAGCGGGTGCTCGATTTCACATGCAATC
Internal bar code:TGTCGTTGAGTAGTTTGCTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1475
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CACACAGCCTCACAAACACG
Suggested primer 2:TGTGCATCTTCGCCTTTCCT