Insertion junction: CLIP2.010049_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010049
Chromosome:chromosome 10
Location:1506269
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428678 GID1,MNMG1,MNMG (1 of 1) K03495 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme (gidA, mnmG, MTO1); tRNA uridine 5-carboxymethylaminomethyl modification enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCACGGACCCAACCCCAACCCCACGGGCCACAGAACACACGCGCGCAC
Internal bar code:TGTCGTTGAGTAGTTTGCTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:840
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCATCTTCGCCTTTCCT
Suggested primer 2:CACACAGCCTCACAAACACG