Insertion junction: CLIP2.010071_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010071
Chromosome:chromosome 4
Location:3495134
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g227950 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGGAGGCTCTGTGCAGCGCTGTGTACAGCAGGCAGGGAGGTTGGATG
Internal bar code:CGCGAAACCCAGCCGTTGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:341
LEAP-Seq percent confirming:52.9412
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGAGCGCCGACTTAATG
Suggested primer 2:CCCAACGACAGGACGTGTTA