Insertion junction: CLIP2.010093_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010093
Chromosome:chromosome 5
Location:1005476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247250 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAACGCCCCCTAGAAACGTGCCTCGGTGCGTGTAGGCGCCACAGGCATT
Internal bar code:GGTGGACTGCGGATGCGGGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2554
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCCGTCATCCTCCTCCA
Suggested primer 2:GCGATATGAGGCTGGAGGTC