Insertion junction: CLIP2.010104_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010104
Chromosome:chromosome 3
Location:8615658
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210513 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTACTCGTAACTTACTGTGAGTCGCGGCTACAACGCGTGCGGACTGC
Internal bar code:CAGCCCGGTAGCTCCCTCACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1509
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGCCATAAGAAACTTCG
Suggested primer 2:GACGTTTCACTGACGAGGGT