Insertion junction: CLIP2.010116_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010116
Chromosome:chromosome 6
Location:6798123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g296150 (1 of 5) K15255 - ATP-dependent DNA helicase PIF1 [EC:3.6.4.12] (PIF1); PIF1-type helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTAGGACCTTTGCCGGCCGGGGCCTGGCCAGCCGGCGCGGCGCTGGG
Internal bar code:CATCGGTTTGTGGGTTGAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:768
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTTGTACAGCCAAACGC
Suggested primer 2:GGAGACAGGGTGTGCTTTGA