Insertion junction: CLIP2.010118_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010118
Chromosome:chromosome 9
Location:2469831
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393200 HSP70C (1 of 1) K04043 - molecular chaperone DnaK (dnaK); Heat shock protein 70C intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCACACCAACTCCGGCTCCAGCCCTCGTATCCATGGGCGTGCCGTGCT
Internal bar code:CAAGATGTCGGGGGCCGACTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:328
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAGTCAGAGAGGAGCAG
Suggested primer 2:ATAACTGATCTGGGCGAGCG