Insertion junction: CLIP2.010121_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010121
Chromosome:chromosome 8
Location:2497248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372500 (1 of 1) K11373 - elongator complex protein 1 (ELP1, IKI3, IKBKAP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGTCGAGATGGCCCAGGAAGGAGGAGGAAGCATCGGCCGGTGCTGTG
Internal bar code:ACTGTGAAATATAGCACCGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:234
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCAGGGAGGATTGTGAA
Suggested primer 2:GGCGAGCTTCGTTTTGTTGT