Insertion junction: CLIP2.010123_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010123
Chromosome:chromosome 3
Location:6703330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195750 (1 of 1) K14961 - COMPASS component SWD1 (RBBP5, SWD1, CPS50) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCGCGCGGGCCGCCCTTCCCCGCACTGGCGGCCCTGGCGGAGGGTCC
Internal bar code:TCATGCTCTATTCGCAACTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2051
LEAP-Seq percent confirming:65.1163
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCATGGCAAAGCATGGTG
Suggested primer 2:CCTGCTACGCCCCTTTTACA