Insertion junction: CLIP2.010129_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010129
Chromosome:chromosome 11
Location:711428
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467623 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCACGTTGGCTCTGACGCAGTCGTATAAGTACGTCAGCCGTTCCTCCG
Internal bar code:GATTATGTTTGGTTCGAGATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3286
LEAP-Seq percent confirming:97.9592
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGTCACCTTTGCACCCAA
Suggested primer 2:TCGCGCCGATATTCGTTGTA