Insertion junction: CLIP2.010132_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010132
Chromosome:chromosome 17
Location:4333151
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g730250 PIT,PIT1 (1 of 1) PTHR12175//PTHR12175:SF2 - AD039 HT014 THIOREDOXIN FAMILY TRP26 // SUBFAMILY NOT NAMED; Proteasome-interacting thioredoxin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAATGCAACCGTCCTGCTCTCCTTCACGACGGGGCGCGGCTCGCCCCTT
Internal bar code:ATTTAATTTAGGGAGACAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1522
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGAGAGCGAGGGAGAGA
Suggested primer 2:AGCTGGATTGCGTGTGTGTA