Insertion junction: CLIP2.010141_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010141
Chromosome:chromosome 9
Location:5057335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406000 BPL1 Biotin-protein ligase; (1 of 1) 6.3.4.11//6.3.4.15 - Biotin--[methylcrotonoyl-CoA-carboxylase] ligase / Biotin--[methylcrotonoyl-CoA-carboxylase] synthetase // Biotin--[acetyl-CoA-carboxylase] ligase / Biotin--protein ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGGGGAGGGGAGAGGAGAGGAGGCCCGGCGCCAGGAGGGGCAGGCC
Internal bar code:GGACATGCCCAGACTATTAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:795
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGAACACATCCTCCATGGCC
Suggested primer 2:GGTCGAATGGGGGTTAACGT