Insertion junction: CLIP2.010142_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010142
Chromosome:chromosome 7
Location:1457292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00052104

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTAGCACATTCACGCGCCGGACTTCCACCGGTCCGGTCCGGCAGCGCC
Internal bar code:TGTTAGGCAGGGCAGTGGCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3870
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAATGGCGCCGTGTAAAG
Suggested primer 2:ACCCTTCCTCTCACAAAGCG