Insertion junction: CLIP2.010145_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010145
Chromosome:chromosome 16
Location:1772272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654992 (1 of 1) 2.1.1.225 - tRNA:m(4)X modification enzyme CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTCTAGGAAGTGCGGCTGGGCCTGCAAACACTTAAACGGGCGCAAGG
Internal bar code:AGCCCACGAAGGCCTTCTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2395
LEAP-Seq percent confirming:93.8775
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CAACACACACAGTCTTCGCG
Suggested primer 2:GTCTAGGATCGCCAGGAACG