Insertion junction: CLIP2.010145_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010145
Chromosome:chromosome 16
Location:1772283
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654992 (1 of 1) 2.1.1.225 - tRNA:m(4)X modification enzyme CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTAGAGGACGTGAATGCCGGGAGCGACGACGAGCCGAACCTGCCGCCG
Internal bar code:CTTGCGTAGCAATAAAGTCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1589
LEAP-Seq percent confirming:90.2439
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTAGGATCGCCAGGAACG
Suggested primer 2:CAACACACACAGTCTTCGCG