Insertion junction: CLIP2.010147_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010147
Chromosome:chromosome 17
Location:1419873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706300 XPD1,RAD3C (1 of 1) K10844 - DNA excision repair protein ERCC-2 (ERCC2, XPD); RAD3/XP-D family DNA-binding helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAGAATCCCAAGTCCCTTACTGGTAATGCAGTTAGGCGCCCCCACATA
Internal bar code:CTACTGTGTAGGCCTCGGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:60
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCACTCATCTCTCGCTG
Suggested primer 2:GCGTGCTTGCGTGTATGTAG