Insertion junction: CLIP2.010163_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010163
Chromosome:chromosome 16
Location:220558
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694750 GT90F30,GT90-30 GT90 family protein 30; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGACCCGACCTGTTGGCAGCAGCTTGCAGCTCCGTGTGCTGCCTCAGC
Internal bar code:AATTTCAATGGTACTGAATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1530
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCCTTCCTCTCGTCTCA
Suggested primer 2:CCCCGTCCGTTCTCCATATG