Insertion junction: CLIP2.010166_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010166
Chromosome:chromosome 9
Location:1229309
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400850 CTL4 (1 of 1) PTHR10877//PTHR10877:SF139 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED; carbohydrate-binding protein CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCCGCGGAGGAGCGGCATCAGGCGCCTGGGCTGCTACGGCAACGCCA
Internal bar code:GGGTGGGTGTTTTGCATTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1100
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACAAGGCTAGACGGT
Suggested primer 2:CTCCGATACCGAGGTCTTGC