Insertion junction: CLIP2.010171_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010171
Chromosome:chromosome 3
Location:5093908
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180400 (1 of 12) IPR011010//IPR013762 - DNA breaking-rejoining enzyme, catalytic core // Integrase-like, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCTAGCTCGTCGAACGTGAGTAGCTCCCGCTGGCGGCGGCGCGGCAC
Internal bar code:GTGCTACTCGACGCTTACCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:6665
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:122
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:122

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGACCAGGAGACGATGT
Suggested primer 2:GCCTTCATACTACGGCCTCC