Insertion junction: CLIP2.010171_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010171
Chromosome:chromosome 3
Location:5093911
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180400 (1 of 12) IPR011010//IPR013762 - DNA breaking-rejoining enzyme, catalytic core // Integrase-like, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATTTGTGGCCTTCCACTTGCTGGACCCAGCAGCCCCCCCGTCGCTGG
Internal bar code:GATCATTACTCGTGTAGAACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2371
LEAP-Seq percent confirming:56.0976
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTCATACTACGGCCTCC
Suggested primer 2:TCGAGACCAGGAGACGATGT