Insertion junction: CLIP2.010175_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010175
Chromosome:chromosome 12
Location:2768708
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g504100 PHX20,NFU2,PFH20 Putative prolyl 4-hydroxylase; (1 of 26) 1.14.11.2 - Procollagen-proline dioxygenase / Protocollagen hydroxylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGGGAGGGGGGCCGTCGTCGCAATGCATCGCAGCCTAATAGCTATGG
Internal bar code:AGGTCCTGAGGTAAGGAGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:955
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCCGCATGCTTTCCTAA
Suggested primer 2:ACTGAGCCATACCAGTGCAC