Insertion junction: CLIP2.010183_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010183
Chromosome:chromosome 3
Location:693763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145827 subtilisin-like Type II membrane endoprotease; (1 of 1) IPR000209//IPR003882//IPR015500 - Peptidase S8/S53 domain // Pistil-specific extensin-like protein // Peptidase S8, subtilisin-related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGATTGAGGTTGAAGCTGCTGTTGGCGCCGTCCAGGATGCCCACCAG
Internal bar code:ATTGGTCTGTCAAGTTTAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:596
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TACCAGCCCAAACTACAGCG
Suggested primer 2:TTGGGCTTGTGGTGTTGGAG