Insertion junction: CLIP2.010189_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010189
Chromosome:chromosome 1
Location:7618918
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800140 (1 of 1) K12800 - NACHT, LRR and PYD domains-containing protein 3 (NLRP3, PYPAF1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCCGAACCTGCTGTGCAGCTCAGCCAGTCCTTCAGCTGCGCGTCAGA
Internal bar code:GGGGCGTAGATTGCGTGGCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1065
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCAAGCCCTGGTGGATGG
Suggested primer 2:CACGTTCTCCACTTACCCCC