Insertion junction: CLIP2.010202_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010202
Chromosome:chromosome 3
Location:702088
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145827 subtilisin-like Type II membrane endoprotease; (1 of 1) IPR000209//IPR003882//IPR015500 - Peptidase S8/S53 domain // Pistil-specific extensin-like protein // Peptidase S8, subtilisin-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCCCGCCCGCCTGCCTGCCTGCCGGCCGGCCGGCCGGCCGGCTAGCC
Internal bar code:CATCTTGCATCGAAACTCGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:342
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCATTGACCTCCTCCACC
Suggested primer 2:CGTCCTGACCACCATGTCTG