Insertion junction: CLIP2.010205_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010205
Chromosome:chromosome 6
Location:1386509
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g259550 (1 of 2) PTHR23074//PTHR23074:SF20 - AAA ATPASE // GH08677P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTGGGGTTATCAGTATTATGGGTGCGGGGCACAAAAGGGCATAGGTCA
Internal bar code:TAGGCTCGGCCGGTTCCGGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2245
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:AATAGCGTCTGAGTACGGCG
Suggested primer 2:ACAGTGCATGTGTGAGGAGG