Insertion junction: CLIP2.010209_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010209
Chromosome:chromosome 10
Location:3969705
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446950 (1 of 2) PTHR23181//PTHR23181:SF7 - RHO GTPASE ACTIVATING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGGACGCCACCGCCTGCGGCGTATAGCTCGTAAGCTGTGTAGGGCGT
Internal bar code:TCGATCTTGCGGCATGCATCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2160
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGAGCCATCTGCCTTTGA
Suggested primer 2:AGTTGCTCGCGAAGACTTCA