Insertion junction: CLIP2.010214_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010214
Chromosome:chromosome 9
Location:2993068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393432 (1 of 1) IPR002421//IPR029060 - 5'-3' exonuclease, N-terminal // PIN domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCGCGGCGGAGGCTGCATGCATCGCGTCATGCGGGTGCAACGGCAGT
Internal bar code:CGATGTTACTACGCAGTTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1554
LEAP-Seq percent confirming:86.1111
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGACGATGGAGAGCTGG
Suggested primer 2:AGCAGCACTTGACATGGGAA