Insertion junction: CLIP2.010214_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010214
Chromosome:chromosome 9
Location:2993069
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393432 (1 of 1) IPR002421//IPR029060 - 5'-3' exonuclease, N-terminal // PIN domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTCGCAGCGCTGGCGGCGGCGCTGGCGGCTCGCGGCCTGGCCTGCCT
Internal bar code:GGCAAACTCCCAAAATGGAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2962
LEAP-Seq percent confirming:72.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCACTTGACATGGGAA
Suggested primer 2:GTACGACGATGGAGAGCTGG