Insertion junction: CLIP2.010218_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010218
Chromosome:chromosome 7
Location:3949696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g339633 DNJ20 (1 of 2) PTHR24078//PTHR24078:SF257 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED; DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGAGATGATGACGTGCTTGCCTCAGGCGTAGCTCCATCACTAGTAT
Internal bar code:CACCTGGAAATTGTAAGGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2169
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAACATGCCAAAGCTGCT
Suggested primer 2:GTCAACGAACGCGAAACCAA