Insertion junction: CLIP2.010222_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010222
Chromosome:chromosome 12
Location:2995590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501950 PPP39 Phosphoprotein phosphatase 2C-related; (1 of 70) 3.1.3.16 - Protein-serine/threonine phosphatase / Serine/threonine specific protein phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCCCCGGCGCAGGTGCATCCTGGGCAGTCGGCGCGGCGGCGTGGCG
Internal bar code:ATAGCTGCTGTAGGCAATGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:380
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGTTGCTGCTGGTGTTG
Suggested primer 2:GGCACGTTACTCTTGTGGGA