Insertion junction: CLIP2.010223_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010223
Chromosome:chromosome 2
Location:2714828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g093550 CYG44 (1 of 1) IPR000014//IPR001054//IPR029787 - PAS domain // Adenylyl cyclase class-3/4/guanylyl cyclase // Nucleotide cyclase; Adenylate/guanylate cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCAAAGGTACGTGTGTGGCCAGGCTCCTTGCCTTCTGTATCAACAGGT
Internal bar code:ATAAAACGGACAAGAGGACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:843
LEAP-Seq percent confirming:17.6471
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCGCTAAGGTTTCTGA
Suggested primer 2:GGTGCTTATATCGTCGCCCA