Insertion junction: CLIP2.010227_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010227
Chromosome:chromosome 3
Location:5713722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186950 PPP13 (1 of 3) K17499 - protein phosphatase 1G [EC:3.1.3.16] (PPM1G, PP2CG); Phosphoprotein phosphatase 2C-related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGAGCCATGGGCGACGTCAAGGTGTGTGTAGGGTGGGGGAGGCAGGA
Internal bar code:TAGTATTCTGTCTCTCTGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4174
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATCAGCACTGCATGTAC
Suggested primer 2:TTGACGAGTCGGGGAGGTAT