Insertion junction: CLIP2.010227_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010227
Chromosome:chromosome 3
Location:5713726
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186950 PPP13 (1 of 3) K17499 - protein phosphatase 1G [EC:3.1.3.16] (PPM1G, PP2CG); Phosphoprotein phosphatase 2C-related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGACTGCCGCCCACCCGCGCCACACCGCCCGGCTGCTGCATCACAAA
Internal bar code:TAGTATTCTGTCTCTCTGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1387
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACGAGTCGGGGAGGTAT
Suggested primer 2:CGCATCAGCACTGCATGTAC