Insertion junction: CLIP2.010247_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010247
Chromosome:chromosome 16
Location:891310
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648150 (1 of 6) PTHR24114//PTHR24114:SF2 - FAMILY NOT NAMED // LEUCINE-RICH REPEAT-CONTAINING PROTEIN 74 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGATTGCCCCGCTTGCGCACCTTGTCTGTGTGCGTGTATGCATGTCCG
Internal bar code:ATTGTGTCAGGGCCCGCTTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:300
LEAP-Seq percent confirming:87.0968
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTGCTGTATGTTCCCTT
Suggested primer 2:ATATCGCCGTAGTGCTTGGG