Insertion junction: CLIP2.010273_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010273
Chromosome:chromosome 9
Location:5328658
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407550 (1 of 1) IPR000104//IPR003034 - Antifreeze protein, type I // SAP domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTGCTAGCAGTAGGCCCGATGCCTTGGGCGGGAGGGCGTGTGGGGCTC
Internal bar code:ACTGTTGAGCGCTGCCTTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:752
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGCACGTCTATGCATCT
Suggested primer 2:GTAAAGACCGCTGCAGCAAC