Insertion junction: CLIP2.010276_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010276
Chromosome:chromosome 2
Location:6335465
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387700 (1 of 6) PTHR22916//PTHR22916:SF9 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTTCGGCGCCGAGGAGGGCAGCCGACCGCGCACGTGGACCACGTTTAG
Internal bar code:GCCGACAGATTGACCTTCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1248
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGCGGTAGGTGTTCATG
Suggested primer 2:GCAGGGAGATAGCAGCTGAG