Insertion junction: CLIP2.010280_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010280
Chromosome:chromosome 11
Location:2008155
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467766 (1 of 1) 6.5.1.3 - RNA ligase (ATP) / Ribonucleic ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGAACCACAACAGGGCGCTGGCCAACAATGCACTCGGGTGGGTCGGG
Internal bar code:GCTCGCGTGGCGAGTAGACCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:573
LEAP-Seq percent confirming:65.3846
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGTGTGCGTGAGTCACCC
Suggested primer 2:CACAGCAAACCAACCGAGTG