Insertion junction: CLIP2.010286_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010286
Chromosome:chromosome 17
Location:5708490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740550 GT90-33,GT90F33 GT90 family protein 33; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGGGTGTGGGCGGCAAGAAGATCTGCTACAACGGCGGCAAGACCTGC
Internal bar code:TTTGATCGAAACCTCGCTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1275
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCGGTAGTAGTATGCGT
Suggested primer 2:TTAACTGCGCGTCTGTCTGT