Insertion junction: CLIP2.010286_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010286
Chromosome:chromosome 17
Location:5708520
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740550 GT90-33,GT90F33 GT90 family protein 33; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGCGGTACTTGCTGCGGGTGGCAGGGGCGTATGCGTGTGCGTGTATG
Internal bar code:CTTTACATACGTTGGGGTTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:335
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTAACTGCGCGTCTGTCTGT
Suggested primer 2:CGTGCGGTAGTAGTATGCGT