Insertion junction: CLIP2.010290_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010290
Chromosome:chromosome 12
Location:6010224
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534400 (1 of 18) IPR011051 - RmlC-like cupin domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGCAGGAACGTCCTGCCTAACACGTGCACCCGTTTTGGAGCACAGC
Internal bar code:AAAACGCTCTACCCAGCTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2219
LEAP-Seq percent confirming:91.8782
LEAP-Seq n confirming:181
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:197

Suggested primers for confirmation by PCR

Suggested primer 1:TCGACTTCACCAACTGGACG
Suggested primer 2:GCTCATAGCTGCCGCTCTTA