Insertion junction: CLIP2.010290_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010290
Chromosome:chromosome 12
Location:6010248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534400 (1 of 18) IPR011051 - RmlC-like cupin domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTAGGGTTTTGACCACGCCGCCAACGGCCACGCGGTACCTGCGCACC
Internal bar code:TCGCTTGGTCGAACCAAAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:992
LEAP-Seq percent confirming:82.8571
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCATAGCTGCCGCTCTTA
Suggested primer 2:TCGACTTCACCAACTGGACG