Insertion junction: CLIP2.010293_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010293
Chromosome:chromosome 8
Location:1194187
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363250 (1 of 3) IPR000104//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACAGCTGGCCGCCGCCCGCCGCCATCCGCAGCAGCGCCGCGGACGGC
Internal bar code:GTATGATGGAGTTGCATTGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2572
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTTTGGGACTTCGAGGC
Suggested primer 2:TCTCCGTCTCCTCCTCATCG