Insertion junction: CLIP2.010294_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010294
Chromosome:chromosome 17
Location:2469822
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715300 PKD2 (1 of 2) PTHR10877//PTHR10877:SF135 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED; Polycystin-2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGAAGACCAAGGGCAACTTCCTCAAGTACTTCCTGTCGGGCTGGAAC
Internal bar code:GGTGACCATAATATATGTACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1441
LEAP-Seq percent confirming:64.5161
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTCCTCAAGCTGGGATT
Suggested primer 2:GCAGACCTGGTTCACCTACC