Insertion junction: CLIP2.010296_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010296
Chromosome:chromosome 12
Location:6631388
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g539050 (1 of 1) IPR000363//IPR016159 - Alpha 1D adrenoceptor // Cullin repeat-like-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTATTGGCATTTTCGACAGTGCACATGGTGAGGCGCGACTAGGTGTACA
Internal bar code:ATCCCGTACGAACTGGCCACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2167
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCGTTACAAGGTCACAGA
Suggested primer 2:GTTTGACCCTGCGGAGTACA