Insertion junction: CLIP2.010296_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010296
Chromosome:chromosome 12
Location:6631411
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g539050 (1 of 1) IPR000363//IPR016159 - Alpha 1D adrenoceptor // Cullin repeat-like-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCAGCCACTCCTCCCGCTGCATTACTCGGTTCCACGTCACCATCCAA
Internal bar code:ACAAGAGTTGTTCTTTTAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3862
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGACCCTGCGGAGTACA
Suggested primer 2:GGGCGTTACAAGGTCACAGA