Insertion junction: CLIP2.010301_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010301
Chromosome:chromosome 7
Location:1472173
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323950 PFH23,PHX23 Putative prolyl 4-hydroxylase; (1 of 1) PTHR10869//PTHR10869:SF50 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGGTCCACCTGCGATACAAAACAAGCATGGTTTCAGAAGTACTGGTG
Internal bar code:GGAAGGGCGACATGATGCGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2590
LEAP-Seq percent confirming:90.2439
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCATGACTAATGCTGCG
Suggested primer 2:CGCTACATGCTGCCAAATCC