Insertion junction: CLIP2.010321_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010321
Chromosome:chromosome 11
Location:2009030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467766 (1 of 1) 6.5.1.3 - RNA ligase (ATP) / Ribonucleic ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCAACCTCTCCACACCTCCCCACAACCTCACCACACTCCCGCCCAGAC
Internal bar code:TTTGAAACGCTGAAAAGATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:276
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGTACCCCATCCCACCC
Suggested primer 2:GCACATTCCTCGTCTTCCCA