Insertion junction: CLIP2.010322_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010322
Chromosome:chromosome 5
Location:2578837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239600 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTTCCCAATGACTTCCCAGCCTTGGAAAGGTCGGGAAACGCCACGCAC
Internal bar code:CCACTAGCTAATTTCAGACGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:309
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATAGACCCCATCAGCCT
Suggested primer 2:GCACACACACACACATGCAT