Insertion junction: CLIP2.010323_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010323
Chromosome:chromosome 3
Location:6522097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194050 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGCCGTGCTGCGGGCGGCCGTGCTGGGCGGGCGCAGCAACGTCCTGC
Internal bar code:ATGTTGAGTCCTATCGAGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1238
LEAP-Seq percent confirming:47.3684
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCAAAGGTAATACGGCCA
Suggested primer 2:TGCTGGAGATGATGATGCCC