Insertion junction: CLIP2.010334_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010334
Chromosome:plastome
Location:62723
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802290 ChreCp026,2716975,psbM photosystem II protein M; (1 of 1) K02714 - photosystem II PsbM protein (psbM) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACGGAACGTCCTGCCAACTGCCTCCTTCCCCTTCCCCGTCGGGACGTG
Internal bar code:TGAGATATGATGTCGCCCGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:847
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TTACGAAGGAGGCAGTTGCG
Suggested primer 2:TTGGTTGGACACAGGTTGCT